Tutorial 2 - how to get started with a basic notebook and script collection

1. Clone the nbscuid-examples repo:

    git clone https://github.com/rmshkv/nbscuid-examples.git 
   

   We’ll be using the testing-simplifying-features collection.

2. cd into the directory nbscuid-examples/testing-simplifying-features, then install the environment specified by environment.yml:

    mamba env create -f environment.yml
   

   This will create an environment called nbscuid-tutorial2, which has nbscuid installed, as well as the packages necessary to run the tutorial notebooks.

3. Activate the environment you just installed:

    conda activate nbscuid-tutorial2
   

4. Run

    nbscuid-run config.yml 
   

   This will run a few simple notebooks showcasing some of nbscuid’s capabilities. The executed notebooks get copied to a directory called computed_notebooks/placeholder-title created in the run_dir specified in your config.yml (by default the same directory that config.yml is in). The script specified in config.yml creates a small txt file in the main directory.

5. Next, run

    nbscuid-build config.yml
   

   This will build the Jupyter Book based on the table of contents specified in the config.yml file, under Jupyter Book Table of Contents. The html files that make up the Jupyter Book will be created under computed_notebooks/placeholder-title/_build/html.